S Corporation vs. LLC Structures

intermediatePublished: 2025-12-30
Illustration for: S Corporation vs. LLC Structures. Comparing tax treatment between S corporations and LLCs, self-employment tax sav...

Entity Structure Tax Fundamentals

Business owners choosing between LLCs and S corporations often focus on liability protection, which is similar for both structures. The meaningful difference is tax treatment: how the IRS taxes the income flowing to owners and what payroll taxes apply.

An LLC is a state-law entity that defaults to pass-through taxation. A single-member LLC is taxed as a sole proprietorship; a multi-member LLC is taxed as a partnership. An S corporation is a tax election available to qualifying corporations (or LLCs that elect corporate treatment). Both pass income through to owners without entity-level federal income tax, but they differ significantly in self-employment tax treatment.

For business owners earning $100,000 or more in business profits, this difference can exceed $10,000 annually in tax savings. Understanding when S corporation status provides benefit and what compliance requirements apply is essential for tax-efficient business structuring.

LLC Default Tax Treatment

A single-member LLC reports all income and expenses on Schedule C of the owner's Form 1040. Net profit is subject to:

  • Income tax: 10-37% federal, plus state income tax
  • Self-employment tax: 15.3% on first $168,600 (2024), then 2.9% on amounts above (plus 0.9% Additional Medicare Tax above $200,000/$250,000 for single/married filers)

Self-employment tax applies to the entire net profit regardless of how much the owner actually withdraws from the business.

Example: Lisa operates a consulting LLC earning $200,000 net profit. Her self-employment tax calculation:

  • Social Security portion: $168,600 x 12.4% = $20,906
  • Medicare portion: $200,000 x 2.9% = $5,800
  • Total self-employment tax: $26,706

Lisa pays this $26,706 regardless of whether she takes distributions or reinvests in the business.

S Corporation Tax Treatment

An S corporation passes income to shareholders as either:

  1. Wages (W-2 salary): Subject to payroll taxes (FICA/Medicare)
  2. Distributions: Not subject to payroll taxes

The key tax savings opportunity: S corporation distributions avoid the 15.3% self-employment tax that applies to all LLC profits. However, the IRS requires S corporation shareholder-employees to pay themselves "reasonable compensation" for services provided.

Same example with S corporation:

Lisa's consulting business earns $200,000 net profit. She pays herself $100,000 salary (reasonable compensation) and takes $100,000 as distributions.

  • Payroll taxes on $100,000 salary: $100,000 x 15.3% = $15,300
  • Payroll taxes on $100,000 distribution: $0
  • Total payroll tax: $15,300

Tax savings compared to LLC: $26,706 - $15,300 = $11,406 annually

This calculation slightly simplifies because S corporation payroll taxes are split between employer (7.65%) and employee (7.65%) portions with different deductibility, but the core savings concept holds.

Reasonable Compensation Requirements

The IRS requires S corporation shareholder-employees to receive reasonable compensation for services performed. This prevents owners from paying zero salary and taking all income as payroll-tax-free distributions.

Factors determining reasonable compensation:

  • Training and experience of the shareholder-employee
  • Duties and responsibilities
  • Time devoted to the business
  • Comparable salaries for similar positions in similar businesses
  • Dividend history of the company
  • Compensation agreements

IRS guidance and court cases consistently look at what an unrelated employer would pay for the same services. An S corporation owner providing $500,000 worth of services cannot reasonably pay $50,000 salary and take $450,000 as distributions.

Safe harbor approaches:

  • Industry compensation surveys (BLS, professional associations)
  • Job comparison websites (matching duties, experience, location)
  • Prior employment W-2 history (what you earned doing similar work)
  • Rule of thumb: 60% salary / 40% distributions is common but not IRS-endorsed

Audit risk factors:

  • Zero or minimal salary with large distributions
  • Salary significantly below prior W-2 employment
  • High-skill professional services (doctors, lawyers, consultants) with low compensation
  • Revenue growth without corresponding salary increases

When S Corporation Makes Sense

S corporation election provides benefit when self-employment tax savings exceed the additional costs of S corporation compliance.

S corporation costs include:

  • Separate payroll processing ($500-$2,000 annually)
  • Quarterly payroll tax filings (Forms 941)
  • Annual W-2 and W-3 filing
  • Annual S corporation return (Form 1120-S) preparation ($1,000-$3,000)
  • State annual reports and fees
  • Potential state-level S corporation taxes

Break-even analysis:

At what profit level do tax savings exceed compliance costs?

Assume:

  • Compliance costs: $3,000 annually
  • Reasonable compensation: 60% of profits
  • Self-employment tax rate: 15.3%

Self-employment tax savings occur on the 40% taken as distributions rather than salary. To save at least $3,000:

$3,000 = (Profit x 40%) x 15.3% $3,000 = Profit x 0.0612 Profit = $49,020

With profits below approximately $50,000, compliance costs may exceed tax savings. Above $50,000-$60,000, S corporation election typically provides net benefit.

Worked Example: Complete Comparison

Scenario: David operates a marketing agency with $180,000 net profit. He works full-time in the business. Comparable marketing directors earn $90,000-$120,000 in his market.

Option 1: LLC (default)

  • Net profit: $180,000
  • Self-employment tax: ($168,600 x 15.3%) + ($11,400 x 2.9%) = $25,796 + $331 = $26,127
  • Deductible SE tax (50%): $13,064
  • Adjusted gross income: $180,000 - $13,064 = $166,936

Option 2: S Corporation

  • Net profit: $180,000
  • Reasonable salary: $105,000 (midpoint of comparable range)
  • Distribution: $75,000
  • Employer payroll tax (7.65%): $8,033
  • Employee payroll tax (7.65%): $8,033
  • Total payroll tax: $16,066
  • Salary is deductible, reducing S corp income to $75,000

Tax savings with S corporation:

  • Self-employment tax avoided: $26,127 - $16,066 = $10,061
  • Less additional compliance costs: $2,500
  • Net annual savings: $7,561

Reasonable compensation documentation: David should document that $105,000 falls within the range for marketing directors with his experience (15 years), in his geographic market, managing a team of comparable size.

S Corporation Requirements and Limitations

Not all businesses qualify for S corporation election:

Eligibility requirements:

  • Domestic corporation or LLC electing corporate treatment
  • Maximum 100 shareholders
  • Only one class of stock
  • Shareholders must be individuals, estates, or certain trusts (no partnerships or corporations as shareholders)
  • No nonresident alien shareholders

Election process:

  • File Form 2553 within 75 days of incorporation or by March 15 for calendar-year election effective that tax year
  • All shareholders must consent to the election
  • Election remains effective until terminated or revoked

State tax considerations:

  • Some states impose franchise taxes on S corporations
  • California charges 1.5% entity-level tax on S corporation net income (minimum $800)
  • New York City taxes S corporations at the corporate rate (not pass-through)
  • New Hampshire taxes S corporation income at the business profits tax rate (7.5%)

Common Pitfalls

Pitfall #1: Setting salary too low

The IRS has successfully challenged S corporation shareholders paying themselves $24,000 while taking $200,000+ in distributions. Underpaying salary triggers back payroll taxes, penalties, and interest. Err toward the higher end of reasonable ranges.

Pitfall #2: Ignoring late payroll deposits

S corporations must deposit payroll taxes by IRS deadlines (generally semi-weekly or monthly depending on liability size). Late deposits trigger penalties starting at 2% and increasing to 15% for deposits more than 10 days late.

Pitfall #3: Mixing personal and business expenses

S corporation status requires respecting the corporate form. Paying personal expenses from the S corporation creates taxable distributions or, worse, reclassification of distributions as wages subject to back payroll taxes.

Pitfall #4: Forgetting state-level S election

Some states require a separate S corporation election filing. Operating as an S corporation federally but a C corporation for state purposes creates complexity and potential double taxation.

Pitfall #5: Converting with appreciated assets

Converting an LLC with appreciated assets to an S corporation can trigger gain recognition. Consult a tax advisor before converting businesses with significant unrealized appreciation in inventory, receivables, or property.

Planning Checklist

Evaluating S corporation election:

  • Calculate current self-employment tax on LLC profits
  • Determine reasonable compensation range for your role
  • Estimate compliance costs (payroll, tax return preparation)
  • Compare net tax savings to compliance costs
  • Review state-level S corporation tax implications

Making the election:

  • Verify eligibility (shareholder count, types, single class of stock)
  • File Form 2553 by March 15 or within 75 days of formation
  • Obtain all shareholder consents
  • Register for payroll tax accounts (federal and state)
  • Set up payroll processing

Ongoing compliance:

  • Pay reasonable salary through regular payroll
  • Make timely payroll tax deposits
  • File quarterly Forms 941
  • Issue W-2s by January 31
  • File Form 1120-S by March 15 (or request extension)
  • Maintain separate business and personal accounts

Annual review:

  • Reassess reasonable compensation as profits change
  • Document basis for salary determination
  • Compare continued S corp benefits to compliance burden
  • Monitor for legislative changes affecting pass-through taxation

S corporation election provides meaningful self-employment tax savings for profitable small businesses, but the benefit must exceed compliance costs and reasonable compensation requirements must be met. Business owners with net profits exceeding $50,000-$60,000 annually should evaluate whether S corporation status provides net tax reduction compared to default LLC treatment.

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